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1

Chromatin dynamics enable transcriptional rhythms in the cnidarian Nematostella vectensis

Weizman, Eviatar N., Tannenbaum, Miriam, Tarrant, Ann M., Hakim, Ofir, Levy, Oren, Sarkies, Peter

Journal:

Year:

2019

Language:

english

File:

PDF, 2.22 MB

english, 2019

2

FIE and CURLY LEAF polycomb proteins interact in the regulation of homeobox gene expression during sporophyte development

Aviva Katz, Moran Oliva, Assaf Mosquna, Ofir Hakim, Nir Ohad

Journal:

The Plant Journal

Year:

2004

Language:

english

File:

PDF, 356 KB

english, 2004

3

3D shortcuts to gene regulation

Ofir Hakim, Myong-Hee Sung, Gordon L Hager

Journal:

Current Opinion in Cell Biology

Year:

2010

Language:

english

File:

PDF, 337 KB

english, 2010

4

SnapShot: Chromosome Conformation Capture

Ofir Hakim, Tom Misteli

Journal:

Year:

2012

Language:

english

File:

PDF, 290 KB

english, 2012

5

Early Th1 Cell Differentiation Is Marked by a Tfh Cell-like Transition

Shingo Nakayamada, Yuka Kanno, Hayato Takahashi, Dragana Jankovic, Kristina T. Lu, Thomas A. Johnson, Hong-wei Sun, Golnaz Vahedi, Ofir Hakim, Robin Handon, Pamela L. Schwartzberg, Gordon L. Hager, Jo

Journal:

Year:

2011

Language:

english

File:

PDF, 2.24 MB

english, 2011

6

From flour to flower: how Polycomb group proteins influence multiple aspects of plant development

Tzung-Fu Hsieh, Ofir Hakim, Nir Ohad, Robert L Fischer

Journal:

Trends in Plant Science

Year:

2003

Language:

english

File:

PDF, 855 KB

english, 2003

7

DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes

Hakim, Ofir, Resch, Wolfgang, Yamane, Arito, Klein, Isaac, Kieffer-Kwon, Kyong-Rim, Jankovic, Mila, Oliveira, Thiago, Bothmer, Anne, Voss, Ty C., Ansarah-Sobrinho, Camilo, Mathe, Ewy, Liang, Genqing,

Journal:

Year:

2012

Language:

english

File:

PDF, 1.12 MB

english, 2012

8

Cycles in spatial and temporal chromosomal organization driven by the circadian clock

Aguilar-Arnal, Lorena, Hakim, Ofir, Patel, Vishal R, Baldi, Pierre, Hager, Gordon L, Sassone-Corsi, Paolo

Journal:

Nature Structural and Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.50 MB

english, 2013

9

A Genome-wide Map of CTCF Multivalency Redefines the CTCF Code

Nakahashi, Hirotaka, Kwon, Kyong-Rim Kieffer, Resch, Wolfgang, Vian, Laura, Dose, Marei, Stavreva, Diana, Hakim, Ofir, Pruett, Nathanael, Nelson, Steevenson, Yamane, Arito, Qian, Jason, Dubois, Wendy,

Journal:

Year:

2013

Language:

english

File:

PDF, 3.24 MB

english, 2013

10

3D view of chromosomes, DNA damage, and translocations

Schwartz, Michal, Hakim, Ofir

Journal:

Current Opinion in Genetics & Development

Year:

2014

Language:

english

File:

PDF, 482 KB

english, 2014

11

The Origin of B Cell Recurrent Chromosomal Translocations: Proximity versus DNA Damage

Casellas, Rafael, Resch, Wolfgang, Hakim, Ofir, Nussenzweig, Michel C.

Journal:

Year:

2013

Language:

english

File:

PDF, 90 KB

english, 2013

12

A Macrohistone Variant Links Dynamic Chromatin Compaction to BRCA1-Dependent Genome Maintenance

Khurana, Simran, Kruhlak, Michael J., Kim, Jeongkyu, Tran, Andy D., Liu, Jinping, Nyswaner, Katherine, Shi, Lei, Jailwala, Parthav, Sung, Myong-Hee, Hakim, Ofir, Oberdoerffer, Philipp

Journal:

Year:

2014

Language:

english

File:

PDF, 2.70 MB

english, 2014

13

Epigenetic targeting of activation-induced cytidine deaminase

Wang, Qiao, Oliveira, Thiago, Jankovic, Mila, Silva, Israel T., Hakim, Ofir, Yao, Kaihui, Gazumyan, Anna, Mayer, Christian T., Pavri, Rushad, Casellas, Rafael, Nussenzweig, Michel C., Robbiani, Davide

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.56 MB

english, 2014

14

Dynamics of chromatin accessibility and long-range interactions in response to glucocorticoid pulsing

Stavreva, Diana A., Coulon, Antoine, Baek, Songjoon, Sung, Myong-Hee, John, Sam, Stixova, Lenka, Tesikova, Martina, Hakim, Ofir, Miranda, Tina, Hawkins, Mary, Stamatoyannopoulos, John A., Chow, Carson

Journal:

Genome Research

Year:

2015

Language:

english

File:

PDF, 7.70 MB

english, 2015

15

Cajal bodies are linked to genome conformation

Wang, Qiuyan, Sawyer, Iain A., Sung, Myong-Hee, Sturgill, David, Shevtsov, Sergey P., Pegoraro, Gianluca, Hakim, Ofir, Baek, Songjoon, Hager, Gordon L., Dundr, Miroslav

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 2.99 MB

english, 2016

16

FIE, a nuclear PRC2 protein, forms cytoplasmic complexes in Arabidopsis thaliana

Oliva, Moran, Butenko, Yana, Hsieh, Tzung-Fu, Hakim, Ofir, Katz, Aviva, Smorodinsky, Nechama I., Michaeli, Daphna, Fischer, Robert L., Ohad, Nir

Journal:

Journal of Experimental Botany

Year:

2016

Language:

english

File:

PDF, 3.10 MB

english, 2016

17

Neuronal CTCF Is Necessary for Basal and Experience-Dependent Gene Regulation, Memory Formation, and Genomic Structure of BDNF and Arc

Sams, Dev Sharan, Nardone, Stefano, Getselter, Dmitriy, Raz, Dana, Tal, Moran, Rayi, Prudhvi Raj, Kaphzan, Hanoch, Hakim, Ofir, Elliott, Evan

Journal:

Year:

2016

Language:

english

File:

PDF, 4.22 MB

english, 2016

18

Genomic effects of glucocorticoids

Grbesa, Ivana, Hakim, Ofir

Journal:

Year:

2017

Language:

english

File:

PDF, 672 KB

english, 2017

19

Hierarchical role for transcription factors and chromatin structure in genome organization along adipogenesis

Sarusi Portuguez, Avital, Schwartz, Michal, Siersbaek, Rasmus, Nielsen, Ronni, Sung, Myong-Hee, Mandrup, Susanne, Kaplan, Tommy, Hakim, Ofir

Journal:

Year:

2017

Language:

english

File:

PDF, 658 KB

english, 2017

20

OCT4 impedes cell fate redirection by the melanocyte lineage master regulator MITF in mouse ESCs

Sheinboim, Danna, Maza, Itay, Dror, Iris, Parikh, Shivang, Krupalnik, Vladislav, Bell, Rachel E., Zviran, Asaf, Suita, Yusuke, Hakim, Ofir, Mandel-Gutfreund, Yael, Khaled, Mehdi, Hanna, Jacob H., Levy

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 2.40 MB

english, 2017

21

Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq

Grbesa, Ivana, Tannenbaum, Miriam, Sarusi-Portuguez, Avital, Schwartz, Michal, Hakim, Ofir

Journal:

Journal of Visualized Experiments

Year:

2017

Language:

english

File:

PDF, 743 KB

english, 2017

22

Comparative analysis of T4 DNA ligases and DNA polymerases used in chromosome conformation capture assays

Schwartz, Michal, Sarusi, Avital, Deitch, Rachel T., Tal, Moran, Raz, Dana, Sung, Myong-Hee, Kaplan, Tommy, Hakim, Ofir

Journal:

Year:

2015

Language:

english

File:

PDF, 1.36 MB

english, 2015

23

Regulatory chromatin landscape in Arabidopsis thaliana roots uncovered by coupling INTACT and ATAC-seq

Tannenbaum, Miriam, Sarusi-Portuguez, Avital, Krispil, Ronen, Schwartz, Michal, Loza, Olga, Benichou, Jennifer I. C., Mosquna, Assaf, Hakim, Ofir

Journal:

Year:

2018

Language:

english

File:

PDF, 5.33 MB

english, 2018

24

Epinephrine soaked tampons induced transient acute dilated cardiomyopathy during FESS procedure

Naddaf, Sari, Ehrenberg, Scott, Hakim, Rony, Mahamid, Muhamad, Turgeman, Yoav, Koren, Ofir

Journal:

BMC Cardiovascular Disorders

Year:

2020

File:

PDF, 3.05 MB

2020

25

Postoperative New-Onset Atrial Fibrillation following Noncardiac Operations: Prevalence, Complication, and Long-Term MACE

Koren, Ofir, Hakim, Rony, Israeli, Asaf, Rozner, Ehud, Turgeman, Yoav, Rossi, Andrea P.

Journal:

Cardiology Research and Practice

Year:

2020

File:

PDF, 1.25 MB

2020

26

Genomic retargeting of p53 and CTCF is associated with transcriptional changes during oncogenic HRas-induced transformation

Schwartz, Michal, Portugez, Avital Sarusi, Attia, Bracha Zukerman, Tannenbaum, Miriam, Cohen, Leslie, Loza, Olga, Chase, Emily, Turman, Yousef, Kaplan, Tommy, Salah, Zaidoun, Hakim, Ofir

Journal:

Communications Biology

Year:

2020

File:

PDF, 3.69 MB

2020